ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0074682
Analysis Project Name Prefix Pseudomonas psychrophila LMG 24276
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 73158
Completion Status Complete
IMG Completion Date 2015-10-20
PI Joyce Loper
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 2.3.0,protocol version=2.3.0 method=RS_HGAP_Assembly.3,smrtpipe.py v1.87.139483,
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5053
Estimated Size 5322378
Sequencing Depth (MIGS-31.1) 139x
Annotation Pipeline
Added By JGI automated process on 2015-06-24
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2636416189
IMG RNA-Seq ID
Genbank
Genbank ID LT629795 (GCA_900106105.1)
Release Date 2016-10-21
NCBI Genbank Version LT629795.1
Assembly Accession GCA_900106105.1
Genbank Release Date 2016-10-21
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of a diverse group of Pseudomonas species
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1066896 (Portal)
ITS Analysis Project Name Pseudomonas psychrophila LMG 24276
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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