ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0073242
Analysis Project Name Prefix Mycobacterium sp. 88MF
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 74388
Completion Status Complete
IMG Completion Date 2015-11-24
PI Jeff Dangl
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. r46652
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 20
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6509
Estimated Size 6734829
Sequencing Depth (MIGS-31.1) 173x
Annotation Pipeline
Added By JGI automated process on 2015-05-18
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2642422555
IMG RNA-Seq ID
Genbank Accession
Genbank ID FOFC00000000 (GCA_900110825.1)
Release Date 2017-07-29
NCBI Genbank Version FOFC01
Assembly Accession GCA_900110825.1
Genbank Release Date 2017-07-29
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Plant associated metagenomes--Microbial community diversity and host control of community assembly across model and emerging plant ecological genomics systems.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1065066 (Portal)
ITS Analysis Project Name Mycobacterium sp. 88MF
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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