ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0069787
Analysis Project Name Prefix Combined Assembly of
Analysis Project Name Suffix Gp0110018, Gp0110022, Gp0110020
Analysis Project Type Combined Assembly
IMG Submission ID 64635
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession
Completion Status Complete
IMG Completion Date 2015-11-01
PI Connor Skennerton
Description Combined assembly of lab-scale EBPR bioreactors. All reads from individual metagenomes were imported into CLC Genomics workbench 6.0, quality trimmed (Q20 minimum) and coassembled using the CLC assembler setting the bubble size and kmer to be automatically detected
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) CLCBio 6.0
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 3214395
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4976071
Estimated Size 2371642897
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Connor Skennerton on 2015-04-02
Last Modified By JGI automated process on 2016-08-01
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300006417
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Enhanced biological phosphorus removal bioreactor microbial communities from the University of Queensland, Australia
Number of Studies 1
Number of Biosamples 10
Number of Projects 10
Derived Analysis Projects 62

 

 

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