ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0069166
Analysis Project Name Prefix Vibrio parahaemolyticus 3644
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 76142
Completion Status Complete
Completion Date 2016-01-05
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) CLC NGS Cell v. 4.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 305
Contig Count 411
Gene Calling Method (MIGS-32)
Gene Count 5095
Estimated Size 4985217
Sequencing Depth (MIGS-31.1) 256x
Annotation Pipeline
Added By JGI automated process on 2015-03-24
Last Modified By JGI automated process on 2018-02-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2645727940
IMG RNA-Seq ID
Genbank
Genbank ID AOPD00000000 (GCA_000877755.1)
Release Date 2015-02-23
NCBI Genbank Version AOPD01
Assembly Accession GCA_000877755.1
ANALYSIS PROJECT COMPOSITION
Study Vibrio parahaemolyticus project - NOAA Northwest Fisheries Science Center
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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