ANALYSIS PROJECT INFORMATION
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GOLD Analysis Project ID
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Ga0062963
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Analysis Project Name
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Metatranscriptome of cow rumen rumen associated fungal communities from Illinois, USA - Cow X-3 switchgrass (Eukaryote Community Metatranscriptome Expression - Other) - mapped to GOLD AP Ga0061013 (Cow X Switchgrass)
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Analysis Project Name Stem
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Metatranscriptome of cow rumen rumen associated fungal communities from Illinois, USA - Cow X-3 switchgrass
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Analysis Project Name Suffix
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- mapped to GOLD AP Ga0061013 (Cow X Switchgrass)
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Analysis Project Type
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Metatranscriptome mapping (other)
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IMG Submission ID
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Completion Status
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Incomplete
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IMG Completion Date
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PI
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Matthias Hess
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Analysis Project Description
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Visibility
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Public
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ANALYSIS PROJECT METADATA
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Assembly Method
(MIGS-30)
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Scaffold Count
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Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count
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Estimated Size
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Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly
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Genbank Anomalous Reason
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Annotation Pipeline
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Added By
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JGI automated process on 2014-12-05
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Last Modified By
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JGI automated process on 2021-12-08
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ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES
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IMG Taxon ID
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IMG RNA-Seq ID
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Genbank Accession
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Genbank Release Date
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ANALYSIS PROJECT COMPOSITION
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Study
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Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
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Number of Projects
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1
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Reference Analysis Project
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Coassembly of Cow X Switchgrass
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JGI INFORMATION
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JGI Data Utilization Status
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Restricted
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ITS Analysis Project ID
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1057063 (Portal)
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ITS Analysis Project Name
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Cow rumen Metatranscriptome - Cow X-3 switchgrass Mapping to Cow X Switchgrass
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ITS Analysis Product Name
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Eukaryote Community Metatranscriptome Expression - Other
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ITS Version Number
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1
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Library Names
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JGI Award DOI
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