ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0062963
Analysis Project Name Metatranscriptome of cow rumen rumen associated fungal communities from Illinois, USA - Cow X-3 switchgrass (Eukaryote Community Metatranscriptome Expression - Other) - mapped to GOLD AP Ga0061013 (Cow X Switchgrass)
Analysis Project Name Stem Metatranscriptome of cow rumen rumen associated fungal communities from Illinois, USA - Cow X-3 switchgrass
Analysis Project Name Suffix - mapped to GOLD AP Ga0061013 (Cow X Switchgrass)
Analysis Project Type Metatranscriptome mapping (other)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Matthias Hess
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2014-12-05
Last Modified By JGI automated process on 2021-12-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Projects 1
Reference Analysis Project Coassembly of Cow X Switchgrass
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1057063 (Portal)
ITS Analysis Project Name Cow rumen Metatranscriptome - Cow X-3 switchgrass Mapping to Cow X Switchgrass
ITS Analysis Product Name Eukaryote Community Metatranscriptome Expression - Other
ITS Version Number 1
Library Names
JGI Award DOI