ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0061019
Analysis Project Name Coassembly of Cow X and Y Switchgrass
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 200627
Completion Status Complete
IMG Completion Date 2018-10-30
PI Matthias Hess
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 0.2.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 4169504
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4567414
Estimated Size 1760403878
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By Matthias Hess on 2014-06-05
Last Modified By JGI automated process on 2023-02-02
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300031118
Genbank Accession
Genbank Release Date
Genome Publication
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Studies 1
Number of Biosamples 6
Number of Projects 6
Number of Related Analysis Projects 38
Derived Analysis Projects (DAP) 12
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1053687 (Portal)
ITS Analysis Project Name Coassembly of Cow X and Y Switchgrass
ITS Analysis Product Name Co-Assembly - Eukaryotic Community Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000804

 

 

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