ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0061018
Analysis Project Name Prefix Coassembly of Cow X and Y Rumen Fluid
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 200629
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession
Completion Status Complete
IMG Completion Date 2018-10-29
PI Matthias Hess
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 0.2.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 3959152
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4300383
Estimated Size 1777714429
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By Matthias Hess on 2014-06-05
Last Modified By JGI automated process on 2019-10-01
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300031085
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Studies 1
Number of Biosamples 6
Number of Projects 6
Derived Analysis Projects 12
JGI INFORMATION
ITS Analysis Project ID 1053686 (Portal)
ITS Analysis Project Name Coassembly of Cow X and Y Rumen Fluid
ITS Analysis Product Name Combined Assembly
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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