ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0061015
Analysis Project Name Prefix Coassembly of Cow Y Rumen Fluid
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 200623
Completion Status Complete
IMG Completion Date 2018-10-25
PI Matthias Hess
PI Name
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 0.2.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 1805637
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1928028
Estimated Size 798893626
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By Matthias Hess on 2014-06-05
Last Modified By JGI automated process on 2019-10-01
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300030773
Genbank Accession
Assembly Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Studies 1
Number of Biosamples 3
Number of Projects 3
Number of Related Analysis Projects 19
Derived Analysis Projects (DAP) 6
JGI INFORMATION
ITS Analysis Project ID 1053683 (Portal)
ITS Analysis Project Name Coassembly of Cow Y Rumen Fluid
ITS Analysis Product Name Combined Assembly
ITS Version Number 1

 

 

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