ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0061012
Analysis Project Name Prefix Coassembly of Cow X Rumen Fluid
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 200625
Completion Status Complete
IMG Completion Date 2018-10-30
PI Matthias Hess
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 0.2.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 2783502
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3013998
Estimated Size 1279496737
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By Matthias Hess on 2014-06-05
Last Modified By JGI automated process on 2021-09-26
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300031117
IMG Metagenome bin count
IMG Predicted viruses 86
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Studies 1
Number of Biosamples 3
Number of Projects 3
Number of Related Analysis Projects 19
Derived Analysis Projects (DAP) 6
JGI INFORMATION
ITS Analysis Project ID 1053680 (Portal)
ITS Analysis Project Name Coassembly of Cow X Rumen Fluid
ITS Analysis Product Name Co-Assembly - Eukaryotic Community Metatranscriptome
ITS Version Number 1

 

 

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