ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0059010
Analysis Project Name Prefix Pseudomonas sp. NFPP16
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 57235
Completion Status Complete
Completion Date 2015-01-18
PI Yuhong Tang
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. r46652
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 20
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6321
Estimated Size 6842543
Sequencing Depth (MIGS-31.1) 160x
Annotation Pipeline
Added By JGI automated process on 2014-09-19
Last Modified By JGI automated process on 2019-05-06
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2600255313
IMG RNA-Seq ID
Genbank
Genbank ID FPKJ00000000 (GCA_900119675.1)
Release Date 2017-04-16
NCBI Genbank Version FPKJ01
Assembly Accession GCA_900119675.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Comparative genomics of bacterial root endophytes of switchgrass collected from native prairies over two seasons
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1049692 (Portal)
ITS Analysis Project Name Pseudomonas sp. NFPP16
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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