ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0059005
Analysis Project Name Prefix Pseudomonas sp. NFPP11
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 55312
Completion Status Complete
Completion Date 2014-12-30
PI Yuhong Tang
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. r46652
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 34
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5729
Estimated Size 6289611
Sequencing Depth (MIGS-31.1) 175x
Annotation Pipeline
Added By JGI automated process on 2014-09-19
Last Modified By JGI automated process on 2017-09-15
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2599185290
IMG RNA-Seq ID
Genbank
Genbank ID FORB00000000 (GCA_900113895.1)
Release Date 2017-08-02
NCBI Genbank Version FORB01
Assembly Accession GCA_900113895.1
ANALYSIS PROJECT COMPOSITION
Study Comparative genomics of bacterial root endophytes of switchgrass collected from native prairies over two seasons
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1049677 (Portal)
ITS Analysis Project Name Pseudomonas sp. NFPP11
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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