ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0059004
Analysis Project Name Prefix Pseudomonas sp. NFPP10
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 55149
Completion Status Complete
Completion Date 2014-12-30
PI Yuhong Tang
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. r46652
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 22
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6322
Estimated Size 6957254
Sequencing Depth (MIGS-31.1) 164x
Annotation Pipeline
Added By JGI automated process on 2014-09-19
Last Modified By JGI automated process on 2017-09-15
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2599185162
IMG RNA-Seq ID
Genbank
Genbank ID FOAQ00000000 (GCA_900109535.1)
Release Date 2017-08-02
NCBI Genbank Version FOAQ01
Assembly Accession GCA_900109535.1
ANALYSIS PROJECT COMPOSITION
Study Comparative genomics of bacterial root endophytes of switchgrass collected from native prairies over two seasons
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1049674 (Portal)
ITS Analysis Project Name Pseudomonas sp. NFPP10
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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