ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0039882
Analysis Project Name Prefix Rhodobacter capsulatus DE442
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 82177
Completion Status Complete
Completion Date 2016-04-04
PI
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. Sep-2013
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 26
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3643
Estimated Size 3754603
Sequencing Depth (MIGS-31.1) 198.0x
Annotation Pipeline IMG Annotation Pipeline v.4.10.2
Added By JGI automated process on 2013-12-04
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2660238248
IMG RNA-Seq ID
Genbank
Genbank ID AYPR00000000 (GCA_000505785.1)
Release Date 2014-02-27
NCBI Genbank Version AYPR01
Assembly Accession GCA_000505785.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Horizontal gene transfer by gene transfer agents- UBC, Canada
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects 0

 

 

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