ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0028793
Analysis Project Name Prefix Holdemanella biformis DSM 3989
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Complete
IMG Completion Date 2009-02-11
PI Human Gut Community Users
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.0.00.20
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 161
Contig Count 161
Gene Calling Method (MIGS-32) GeneMark v. 3.3, Glimmer2 v. 2.13
Gene Count 2577
Estimated Size 2415920
Sequencing Depth (MIGS-31.1) 31.7x
Annotation Pipeline IMG/W 2.8
Added By Human Gut Community Users on 2007-12-30
Last Modified By JGI automated process on 2017-03-08
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 642979360
Genbank Accession
Genbank ID ABYT00000000 (GCA_000156655)
Assembly Accession GCA_000156655
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Human Microbiome Project (HMP) Reference Genomes
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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