Studies
|
56,290 |
|
Biosamples
|
195,545 |
|
Sequencing Projects
|
523,554 |
|
Analysis Projects
|
381,673 |
| Organisms | 484,046 |
| ANALYSIS PROJECT INFORMATION | |||||||
|---|---|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0025988 |
||||||
| Analysis Project Name |
Crenarchaeota archaeon SCGC AAA471-L13 (contamination screened) |
||||||
| Analysis Project Name Stem |
Crenarchaeota archaeon SCGC AAA471-L13 |
||||||
|
Analysis Project Name Suffix
|
|
||||||
|
Analysis Project Type
|
Single Cell Analysis (screened) |
||||||
|
IMG Submission ID
|
9998 | ||||||
| Completion Status |
Complete |
||||||
|
IMG Completion Date
|
2012-07-27 |
||||||
| PI | Tanja Woyke | ||||||
|
Analysis Project Description
|
|
||||||
|
Contamination Screening Method
|
|
||||||
| Visibility | Public | ||||||
| ANALYSIS PROJECT METADATA | |||||||
|
Assembly Method
(MIGS-30)
|
Velvet v. 1.1.04, ALLPATHS v. R37654 |
||||||
|
IMG Decontamination
|
Yes |
||||||
|
IMG Decontamination Method
|
Manual |
||||||
|
Number of tRNAs
|
|
||||||
|
tRNA Software
|
|
||||||
|
Completeness Strategy
|
|
||||||
|
Scaffold Count
|
48 |
||||||
|
Contig Count
|
48 |
||||||
|
Gene Calling Method
(MIGS-32)
|
Prodigal 2.5 |
||||||
| Gene Count |
1009 |
||||||
| Estimated Size |
833677 |
||||||
|
Sequencing Depth
(MIGS-31.1)
|
|
||||||
| Genbank Anomalous Assembly |
No |
||||||
| Genbank Anomalous Reason |
|
||||||
| Annotation Pipeline |
|
||||||
| Added By | Tanja Woyke on 2011-07-26 | ||||||
| Last Modified By | JGI automated process on 2023-03-31 | ||||||
|
ORF Comparison Tools
|
|
||||||
|
16S Recovered
|
|
||||||
|
16S Recovery Software
|
|
||||||
| PROJECT EXTERNAL REFERENCES | |||||||
|
IMG Taxon ID
|
2264867268 |
||||||
|
Genbank Accession
|
|
||||||
| Genbank Release Date |
2013-12-12 |
||||||
| ANALYSIS PROJECT COMPOSITION | |||||||
| Study |
GEBA-MDM |
||||||
|
Number of Studies
|
1 |
||||||
|
Number of Projects
|
1 |
||||||
|
Number of Related Analysis Projects
|
0 |
||||||
| JGI INFORMATION | |||||||
|
JGI Data Utilization Status
|
Unrestricted |
||||||
|
ITS Analysis Project ID
|
1423666 (Portal) |
||||||
|
ITS Analysis Project Name
|
Crenarchaeota archaeon SCGC AAA471-L13 (contamination screened) |
||||||
|
ITS Analysis Product Name
|
Microbial Minimal Draft Single Cell Screened Genome |
||||||
| ITS Version Number |
1 |
||||||
|
Library Names
|
|
||||||
|
JGI Award DOI
|
|||||||
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