Studies
|
52,460 |
|
Biosamples
|
170,231 |
|
Sequencing Projects
|
472,495 |
|
Analysis Projects
|
360,355 |
| Organisms | 460,370 |
| ANALYSIS PROJECT INFORMATION | |||||
|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0024910 |
||||
| Analysis Project Name |
Thioalkalivibrio paradoxus ARh 1 |
||||
|
Analysis Project Name Suffix
|
|
||||
|
Analysis Project Type
|
Genome Analysis (Isolate) |
||||
|
IMG Submission ID
|
5720 | ||||
| Completion Status |
Complete |
||||
|
IMG Completion Date
|
2011-07-19 |
||||
| PI | Gerard Muyzer | ||||
|
Analysis Project Description
|
|
||||
| Visibility | Public | ||||
| ANALYSIS PROJECT METADATA | |||||
|
Assembly Method
(MIGS-30)
|
Newbler v. 2.3 |
||||
|
IMG Decontamination
|
No |
||||
|
IMG Decontamination Method
|
|
||||
|
Scaffold Count
|
1 |
||||
|
Contig Count
|
16 |
||||
|
Gene Calling Method
(MIGS-32)
|
Prodigal 2.5, GenePRIMP |
||||
| Gene Count |
3557 |
||||
| Estimated Size |
3756729 |
||||
|
Sequencing Depth
(MIGS-31.1)
|
30x |
||||
| Genbank Anomalous Assembly |
No |
||||
| Genbank Anomalous Reason |
|
||||
| Annotation Pipeline |
|
||||
| Added By |
Gerard Muyzer
on 2010-09-23 |
||||
| Last Modified By |
JGI automated process
on 2022-05-16 |
||||
|
ORF Comparison Tools
|
|
||||
| PROJECT EXTERNAL REFERENCES | |||||
|
IMG Taxon ID
|
2506520043 |
||||
|
Genbank Accession
|
|
||||
| Genbank Release Date |
2015-08-15 |
||||
| ANALYSIS PROJECT COMPOSITION | |||||
| Study |
Genome sequencing of 3 haloalkaliphilic thiocyanate-utilizing chemolithoautotrophic bacteria of the genus Thioalkalivibrio with a potential use for a sustainable removal of toxic sulfur compounds from waste streams and energy carriers |
||||
|
Number of Studies
|
1 |
||||
|
Number of Projects
|
1 |
||||
|
Number of Related Analysis Projects
|
0 |
||||
| JGI INFORMATION | |||||
|
JGI Data Utilization Status
|
Unrestricted |
||||
|
ITS Analysis Project ID
|
1377783 (Portal) |
||||
|
ITS Analysis Project Name
|
Thioalkalivibrio paradoxus ARh 1 |
||||
|
ITS Analysis Product Name
|
Microbial Minimal Draft Isolate Genome |
||||
| ITS Version Number |
1 |
||||
|
JGI Award DOI
|
10.46936/10.25585/60007301 |
||||
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