ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0023898
Analysis Project Name Prefix Aggregatibacter actinomycetemcomitans sv. C D11S-1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 35151
Completion Status Complete
Completion Date 2014-03-23
PI Casey Chen
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 4
Contig Count
Gene Calling Method (MIGS-32) Glimmer3
Gene Count 2358
Estimated Size 2204665
Sequencing Depth (MIGS-31.1) 25x
Annotation Pipeline
Added By Nikos Kyrpides on 2009-08-21
Last Modified By JGI automated process on 2016-06-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2561511125
IMG RNA-Seq ID
Genbank
Genbank ID GQ866235 (GCA_000146265)
Release Date 2014-01-31
Genbank ID GQ866234 (GCA_000146265)
Release Date 2014-01-31
Genbank ID CP001733 (GCA_000146265)
Release Date 2014-01-31
Assembly Accession GCA_000146265
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aggregatibacter genome sequencing, USC School of Dentistry, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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