ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0015341
Analysis Project Name Prefix Candidatus Arthromitus sp. SFB-3
Analysis Project Name Suffix (unscreened)
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 18345
Completion Status Complete
IMG Completion Date 2013-08-31
PI
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.3
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 441
Contig Count 441
Gene Calling Method (MIGS-32)
Gene Count 1330
Estimated Size 951018
Sequencing Depth (MIGS-31.1) 30x
Annotation Pipeline
Added By JGI automated process on 2011-07-14
Last Modified By Supratim Mukherjee on 2017-03-01
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2534681892
IMG RNA-Seq ID
Genbank
Genbank ID AFXT00000000 (GCA_000252705)
Release Date 2013-11-19
NCBI Genbank Version AFXT01
Assembly Accession GCA_000252705
Genbank Release Date 2013-11-19
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Symbiotic lifestyle of segmented filamentous bacteria (SFB) revealed by single-cell genomics
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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