ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0007974
Analysis Project Name Prefix Pseudomonas sp. Snoq117.2
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 60296
Completion Status Complete
IMG Completion Date 2015-04-13
PI Dale Pelletier
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. r46652
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 49
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 5248
Estimated Size 5543492
Sequencing Depth (MIGS-31.1) 166x
Annotation Pipeline
Added By Dale Pelletier on 2014-03-04
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2609459739
IMG RNA-Seq ID
Genbank
Genbank ID FOED00000000 (GCA_900110545.1)
Release Date 2017-07-29
NCBI Genbank Version FOED01
Assembly Accession GCA_900110545.1
Genbank Release Date 2017-07-29
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Populus root and rhizosphere microbial communities from Tennessee, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1035760 (Portal)
ITS Analysis Project Name Pseudomonas sp. Snoq117.2
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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