ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0007966
Analysis Project Name Prefix Agrobacterium rhizogenes YR147
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 44936
Completion Status Complete
IMG Completion Date 2014-07-26
PI Dale Pelletier
PI Name
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) vpAllpaths v. r46652
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 44
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 7008
Estimated Size 7318924
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Dale Pelletier on 2014-03-04
Last Modified By JGI automated process on 2020-12-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2582581315
Genbank Accession
Genbank ID JQJW00000000 (GCA_000745725.1)
Assembly Accession GCA_000745725.1
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Populus root and rhizosphere microbial communities from Tennessee, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1035736 (Portal)
ITS Analysis Project Name Rhizobium rhizogenes YR147
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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