ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0007957
Analysis Project Name Prefix Agrobacterium rhizogenes CF263
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 45858
Completion Status Complete
IMG Completion Date 2014-08-18
PI Dale Pelletier
PI Name
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) vpAllpaths v. r46652
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 16
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 6383
Estimated Size 6667127
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Dale Pelletier on 2014-03-04
Last Modified By JGI automated process on 2020-12-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2585427609
Genbank Accession
Genbank ID JUHF00000000 (GCA_000799685.1)
Release Date 2014-12-09
NCBI Genbank Version JUHF01
Assembly Accession GCA_000799685.1
Genbank Release Date 2014-12-09
ANALYSIS PROJECT COMPOSITION
Study Populus root and rhizosphere microbial communities from Tennessee, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1035709 (Portal)
ITS Analysis Project Name Rhizobium rhizogenes CF263
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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