ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0007448
Analysis Project Name Prefix Oceanicaulis sp. HL-87
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 43938
Completion Status Complete
IMG Completion Date 2014-06-30
PI Jim Fredrickson
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 2.2.0.p1
IMG Decontamination No
IMG Decontamination Method
GenePRIMP Yes
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 2664
Estimated Size 2743966
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Jim Fredrickson on 2014-01-17
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2579779170
IMG RNA-Seq ID
Genbank
Genbank ID JQMZ00000000 (GCA_000744995.1)
Assembly Accession GCA_000744995.1
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Microbial Interactions in Extremophilic Mat Communities
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1033794 (Portal)
ITS Analysis Project Name Oceanicaulis sp. HL-87
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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