ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0006996
Analysis Project Name Prefix Nitrospinae bacterium SCGC AD-129-P22
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 72531
Completion Status Complete
IMG Completion Date 2015-10-08
PI Ramunas Stepanauskas
PI Name
Analysis Project Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.0.0
IMG Decontamination No
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 49
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 1094
Estimated Size 1062010
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Ramunas Stepanauskas on 2013-11-21
Last Modified By JGI automated process on 2019-05-03
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2634166692
Genbank Accession
Assembly Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Dark ocean microbial single cell genomics
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1031954 (Portal)
ITS Analysis Project Name Nitrospinae bacterium SCGC AD-129-P22 Unscreened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Unscreened Genome
ITS Version Number 1

 

 

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