ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0006996 |
Analysis Project Name Prefix |
Nitrospinae bacterium SCGC AD-129-P22 |
Analysis Project Name Suffix
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Analysis Project Type
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Single Cell Analysis (unscreened) |
IMG Submission ID
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72531 |
Completion Status |
Complete |
IMG Completion Date
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2015-10-08 |
PI | Ramunas Stepanauskas |
PI Name |
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Analysis Project Description
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Contamination Screening Method
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Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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spades v. 3.0.0 |
IMG Decontamination
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No |
IMG Decontamination Method
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|
Number of tRNAs
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|
tRNA Software
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Completeness Strategy
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Scaffold Count
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49 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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Prodigal 2.5 |
Gene Count |
1094 |
Estimated Size |
1062010 |
Sequencing Depth
(MIGS-31.1)
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|
Annotation Pipeline |
|
Added By |
Ramunas Stepanauskas
on 2013-11-21 |
Last Modified By |
JGI automated process
on 2019-05-03 |
ORF Comparison Tools
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16S Recovered
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16S Recovery Software
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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2634166692 |
Genbank Accession
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Assembly Accession |
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Genbank Release Date |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Dark ocean microbial single cell genomics |
Number of Studies
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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0 |
JGI INFORMATION | |
ITS Analysis Project ID
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1031954 (Portal) |
ITS Analysis Project Name
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Nitrospinae bacterium SCGC AD-129-P22 Unscreened |
ITS Analysis Product Name
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Microbial Minimal Draft Single Cell Unscreened Genome |
ITS Version Number |
1 |
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