ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0006996
Analysis Project Name Prefix Nitrospinae bacterium SCGC AD-129-P22
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 72531
Completion Status Complete
IMG Completion Date 2015-10-08
PI Ramunas Stepanauskas
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.0.0
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 49
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 1094
Estimated Size 1062010
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Ramunas Stepanauskas on 2013-11-21
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2634166692
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Dark ocean microbial single cell genomics
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1031954 (Portal)
ITS Analysis Project Name Nitrospinae bacterium SCGC AD-129-P22 Unscreened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Unscreened Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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