ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0006909
Analysis Project Name Prefix archaeon SCGC AB-215-J19
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 72563
Completion Status Complete
IMG Completion Date 2015-10-08
PI Ramunas Stepanauskas
PI Name
Analysis Project Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.0.0
IMG Decontamination No
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 22
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 251
Estimated Size 248091
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Ramunas Stepanauskas on 2013-11-21
Last Modified By JGI automated process on 2019-05-03
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2634166724
Genbank Accession
Assembly Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Dark ocean microbial single cell genomics
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1031693 (Portal)
ITS Analysis Project Name archaeon SCGC AB-215-J19 Unscreened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Unscreened Genome
ITS Version Number 1

 

 

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