ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0005707
Analysis Project Name Prefix Methylobacterium sp. UNCCL110
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 40571
Completion Status Complete
IMG Completion Date 2014-06-12
PI Jeff Dangl
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) vpAllpaths v. r46652
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 138
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 6411
Estimated Size 6613608
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Jeff Dangl on 2013-09-11
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2574180438
IMG RNA-Seq ID
Genbank
Genbank ID JQJG00000000 (GCA_000745415.1)
Assembly Accession GCA_000745415.1
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Plant associated metagenomes--Microbial community diversity and host control of community assembly across model and emerging plant ecological genomics systems.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1026421 (Portal)
ITS Analysis Project Name Methylobacterium sp. UNCCL110
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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