ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0005044
Analysis Project Name Prefix Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 29651
Completion Status Complete
IMG Completion Date 2014-03-05
PI Jill Banfield
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo,newbler,minimus2 v. Version 1.05: testing... 2010,(v2.8 (20120726_1306)),AMOS/3.1.0
Scaffold Count 12231354
Contig Count
Gene Calling Method (MIGS-32) FragGeneScan version 1.16, prokaryotic GeneMark.hmm version 2.8, Metagene Annotator version 1.0, Prodigal V2.50: November, 2010
Gene Count 12297493
Estimated Size 3130970256
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Jill Banfield on 2013-09-09
Last Modified By JGI automated process on 2021-11-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300002407
IMG Metagenome bin count 5
IMG Predicted viruses 69
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from Rifle, Colorado, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1023835 (Portal)
ITS Analysis Project Name Rifle CSP2_sed 13_1
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1

 

 

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