ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0005044
Analysis Project Name Prefix Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 29651
Completion Status Complete
IMG Completion Date 2014-03-05
PI Jill Banfield
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo,newbler,minimus2 v. Version 1.05: testing... 2010,(v2.8 (20120726_1306)),AMOS/3.1.0
Scaffold Count 12231354
Contig Count
Gene Calling Method (MIGS-32) FragGeneScan version 1.16, prokaryotic GeneMark.hmm version 2.8, Metagene Annotator version 1.0, Prodigal V2.50: November, 2010
Gene Count 12297493
Estimated Size 3130970256
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Jill Banfield on 2013-09-09
Last Modified By JGI automated process on 2021-07-24
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300002407
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from Rifle, Colorado, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1023835 (Portal)
ITS Analysis Project Name Rifle CSP2_sed 13_1
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1

 

 

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