ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0001236
Analysis Project Name Prefix Chitinophaga sp. JGI 0001002-D04
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 19960
Completion Status Complete
IMG Completion Date 2013-09-06
PI Susannah Tringe
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 158
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 1514
Estimated Size 1624880
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Susannah Tringe on 2012-09-25
Last Modified By JGI automated process on 2017-06-04
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2537562249
IMG RNA-Seq ID
Genbank
Genbank ID AUNO00000000 (GCA_000463735.1)
Release Date 2014-06-19
NCBI Genbank Version AUNO01
Assembly Accession GCA_000463735.1
Genbank Release Date 2014-06-19
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Rhizosphere Grand Challenge Single Cell Sequencing
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1007699 (Portal)
ITS Analysis Project Name Chitinophaga sp. JGI 0001002-D4 Unscreened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Unscreened Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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