ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0001128
Analysis Project Name Prefix Salinispora pacifica CNT124
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 10977
Completion Status Complete
Completion Date 2012-10-31
PI paul r. jensen
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.1.04, ALLPATHS v. R37654
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 47
Contig Count 55
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 4796
Estimated Size 5164130
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By paul r. jensen on 2012-07-05
Last Modified By JGI automated process on 2017-06-04
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2517572159
IMG RNA-Seq ID
Genbank
Genbank ID ARGM00000000 (GCA_000374785.1)
Release Date 2014-06-18
NCBI Genbank Version ARGM01
Assembly Accession GCA_000374785.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of the marine actinomycete Salinispora pacifica
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1007337 (Portal)
ITS Analysis Project Name Salinispora pacifica CNT-124
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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