Studies
|
56,335 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,361 |
|
Analysis Projects
|
384,993 |
| Organisms | 484,222 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0604561 |
| Analysis Project Name |
Sediment microbial communites from ultra-acidic sulfur-rich Arctic pond from Smoking Hills, Northwest Territories, Canada - SH11 Reassembly |
| Analysis Project Name Stem |
Sediment microbial communites from ultra-acidic sulfur-rich Arctic pond from Smoking Hills, Northwest Territories, Canada - SH11 |
|
Analysis Project Name Suffix
|
Reassembly |
|
Analysis Project Type
|
Metagenome Analysis |
|
IMG Submission ID
|
300451 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2023-05-03 |
| PI | Dunfield Laboratory |
|
Analysis Project Description
|
Reassembly of the original data |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
SPAdes v. 3.15.5 |
|
Scaffold Count
|
24118 |
|
Contig Count
|
25038 |
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
79032 |
| Estimated Size |
60562466 |
|
Sequencing Depth
(MIGS-31.1)
|
89x illumina |
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.1.14 |
| Added By | Dunfield Laboratory on 2023-04-27 |
| Last Modified By | JGI automated process on 2023-05-05 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300061658 |
| IMG Metagenome bin count | 0 |
| IMG Predicted viruses |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Ultra-acidic sulfur-rich Arctic ponds from Smoking Hills, Northwest Territories, Canada |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
1 |
|
Derived Analysis Projects (DAP)
|
0 |
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