ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0597147
Analysis Project Name Combined Assembly of surface microbial communities from International Space Station, Mission 2 samples, PMA-treated
Analysis Project Name Stem Combined Assembly of
Analysis Project Name Suffix surface microbial communities from International Space Station, Mission 2 samples, PMA-treated
Analysis Project Type Combined Assembly
IMG Submission ID 298335
Completion Status Complete
IMG Completion Date 2023-04-05
PI Venkateswaran K
Analysis Project Description Combined assembly and annotation of public SRA data set for mission 2 samples, PMA-treated
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Custom JGI assembly v. 1.
IMG Decontamination
IMG Decontamination Method
Scaffold Count 450980
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 734638
Estimated Size 268240422
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.13
Added By Supratim Mukherjee on 2023-02-15
Last Modified By JGI automated process on 2023-04-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300061151
Genbank Accession
Genbank Release Date
SRA Runs
 
SRA Run Id SRR6853342  (Link to NCBI )
 
SRA Run Id SRR6853343  (Link to NCBI )
 
SRA Run Id SRR6853383  (Link to NCBI )
 
SRA Run Id SRR6853346  (Link to NCBI )
 
SRA Run Id SRR6853379  (Link to NCBI )
 
SRA Run Id SRR6853344  (Link to NCBI )
 
SRA Run Id SRR6853345  (Link to NCBI )
Genome Publication
ANALYSIS PROJECT COMPOSITION
Study Surface microbial communities from International Space Station, USA module
Number of Studies 1
Number of Biosamples 7
Number of Projects 7
Number of Related Analysis Projects 15
Derived Analysis Projects (DAP) 0

 

 

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