ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0597145
Analysis Project Name Combined Assembly of surface microbial communities from International Space Station, Mission 1 samples, PMA-treated
Analysis Project Name Stem Combined Assembly of
Analysis Project Name Suffix surface microbial communities from International Space Station, Mission 1 samples, PMA-treated
Analysis Project Type Combined Assembly
IMG Submission ID 298332
Completion Status Complete
IMG Completion Date 2023-04-05
PI Venkateswaran K
Analysis Project Description Combined assembly and annotation of public SRA data set for mission 1 samples, PMA-treated
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Custom JGI assembly v. 1.
IMG Decontamination
IMG Decontamination Method
Scaffold Count 548260
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 870951
Estimated Size 331592856
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.13
Added By Supratim Mukherjee on 2023-02-15
Last Modified By JGI automated process on 2023-04-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300061148
Genbank Accession
Genbank Release Date
SRA Runs
 
SRA Run Id SRR6853353  (Link to NCBI )
 
SRA Run Id SRR6853354  (Link to NCBI )
 
SRA Run Id SRR6853351  (Link to NCBI )
 
SRA Run Id SRR6853352  (Link to NCBI )
 
SRA Run Id SRR6853348  (Link to NCBI )
 
SRA Run Id SRR6853349  (Link to NCBI )
 
SRA Run Id SRR6853347  (Link to NCBI )
Genome Publication
ANALYSIS PROJECT COMPOSITION
Study Surface microbial communities from International Space Station, USA module
Number of Studies 1
Number of Biosamples 7
Number of Projects 7
Number of Related Analysis Projects 15
Derived Analysis Projects (DAP) 0

 

 

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