ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0591329
Analysis Project Name Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (v5.1 annotation)
Analysis Project Name Stem Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703
Analysis Project Name Suffix (v5.1 annotation)
Analysis Project Type Metagenome Analysis
IMG Submission ID 291477
Completion Status Complete
IMG Completion Date 2022-12-24
PI Holly Simon
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 288492
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 435971
Estimated Size 197254235
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.13
Added By JGI automated process on 2022-12-22
Last Modified By JGI automated process on 2023-02-23
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300059697
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Estuarine microbial communities from the Columbia River estuary, to analyze effect of nutrient fluxes, a time series
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1421831 (Portal)
ITS Analysis Project Name Columbia river estuary metaG S.703 (v5.1 annotation)
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 3
Library Names AUSOA
JGI Award DOI