Studies
|
56,035 |
|
Biosamples
|
191,586 |
|
Sequencing Projects
|
515,741 |
|
Analysis Projects
|
381,622 |
| Organisms | 480,240 |
| ANALYSIS PROJECT INFORMATION | |||||||
|---|---|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0587352 |
||||||
| Analysis Project Name |
Candidatus Paracaedibacteraceae bacterium Lake Konstanz |
||||||
|
Analysis Project Name Suffix
|
|
||||||
|
Analysis Project Type
|
Single Cell Analysis (unscreened) |
||||||
|
IMG Submission ID
|
292309 | ||||||
| Completion Status |
Complete |
||||||
|
IMG Completion Date
|
2023-01-24 |
||||||
| PI | Unknown | ||||||
|
Analysis Project Description
|
Submitting a public genome from NCBI/GenBank to IMG for analysis. |
||||||
|
Contamination Screening Method
|
|
||||||
| Visibility | Public | ||||||
| ANALYSIS PROJECT METADATA | |||||||
|
Assembly Method
(MIGS-30)
|
Canu v. 1.5 |
||||||
|
IMG Decontamination
|
|
||||||
|
IMG Decontamination Method
|
|
||||||
|
Number of tRNAs
|
|
||||||
|
tRNA Software
|
|
||||||
|
Completeness Strategy
|
|
||||||
|
Scaffold Count
|
1 |
||||||
|
Contig Count
|
|
||||||
|
Gene Calling Method
(MIGS-32)
|
|
||||||
| Gene Count |
1275 |
||||||
| Estimated Size |
1391311 |
||||||
|
Sequencing Depth
(MIGS-31.1)
|
212.0x |
||||||
| Genbank Anomalous Assembly |
No |
||||||
| Genbank Anomalous Reason |
|
||||||
| Annotation Pipeline |
IMG Annotation Pipeline v.5.1.13 |
||||||
| Added By | JGI automated process on 2022-10-26 | ||||||
| Last Modified By | JGI automated process on 2023-02-13 | ||||||
|
ORF Comparison Tools
|
|
||||||
|
16S Recovered
|
|
||||||
|
16S Recovery Software
|
|
||||||
| PROJECT EXTERNAL REFERENCES | |||||||
|
IMG Taxon ID
|
2999333406 |
||||||
|
Genbank Accession
|
|
||||||
| Genbank Release Date |
2020-10-19 |
||||||
| ANALYSIS PROJECT COMPOSITION | |||||||
| Study |
Candidatus Paracaedibacteraceae bacterium Lake Konstanz |
||||||
|
Number of Studies
|
1 |
||||||
|
Number of Projects
|
1 |
||||||
|
Number of Related Analysis Projects
|
0 |
||||||
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