ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0571070 |
Analysis Project Name |
Marine Group A AB-755_M21D07 re-assembly |
Analysis Project Name Stem |
Marine Group A AB-755_M21D07 |
Analysis Project Name Suffix
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re-assembly |
Analysis Project Type
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Single Cell Analysis (screened) |
IMG Submission ID
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277130 |
Completion Status |
Complete |
IMG Completion Date
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2022-08-24 |
PI | Steven J. Hallam |
Analysis Project Description
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decontaminated version of Marine Group A SAG |
Contamination Screening Method
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CheckM |
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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SPADES v. 3.9 |
IMG Decontamination
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IMG Decontamination Method
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Number of tRNAs
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tRNA Software
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Completeness Strategy
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Scaffold Count
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18 |
Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count |
609 |
Estimated Size |
641435 |
Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.5.1.8 |
Added By | Alvaro M. Plominsky on 2022-08-03 |
Last Modified By | JGI automated process on 2022-09-07 |
ORF Comparison Tools
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16S Recovered
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16S Recovery Software
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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2974486097 |
Genbank Accession
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Genbank Release Date |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Microbial Systems Ecology of Expanding Oxygen Minimum Zones in the Eastern Subtropical North Pacific Ocean |
Number of Studies
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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1 |
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