ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0571068
Analysis Project Name Marine Group A AB-746_P06AB-902 re-assembly
Analysis Project Name Stem Marine Group A AB-746_P06AB-902
Analysis Project Name Suffix re-assembly
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 277128
Completion Status Complete
IMG Completion Date 2022-08-24
PI Steven J. Hallam
Analysis Project Description decontaminated version of Marine Group A SAG
Contamination Screening Method CheckM
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPADES v. 3.9
IMG Decontamination
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy Marker Gene
Scaffold Count 14
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 673
Estimated Size 665302
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.8
Added By Alvaro M. Plominsky on 2022-08-03
Last Modified By JGI automated process on 2022-09-07
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2974485419
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Microbial Systems Ecology of Expanding Oxygen Minimum Zones in the Eastern Subtropical North Pacific Ocean
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1

 

 

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