ANALYSIS PROJECT INFORMATION | |||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GOLD Analysis Project ID
![]() |
Ga0557678 |
||||||||||||||||
Analysis Project Name |
Levilactobacillus brevis YSJ3 |
||||||||||||||||
Analysis Project Name Suffix
![]() |
|
||||||||||||||||
Analysis Project Type
![]() |
Genome Analysis (Isolate) |
||||||||||||||||
IMG Submission ID
![]() |
271881 | ||||||||||||||||
Completion Status |
Complete |
||||||||||||||||
IMG Completion Date
![]() |
2022-06-17 |
||||||||||||||||
PI | Jianming Zhang | ||||||||||||||||
Analysis Project Description
![]() |
Submitting a public genome from NCBI/GenBank to IMG for analysis. |
||||||||||||||||
Visibility | Public | ||||||||||||||||
ANALYSIS PROJECT METADATA | |||||||||||||||||
Assembly Method
(MIGS-30)
![]() |
SPAdes v. 3.13.0; CANU v. 1.8 |
||||||||||||||||
IMG Decontamination
![]() |
|
||||||||||||||||
IMG Decontamination Method
![]() |
|
||||||||||||||||
Scaffold Count
![]() |
8 |
||||||||||||||||
Contig Count
![]() |
|
||||||||||||||||
Gene Calling Method
(MIGS-32)
![]() |
|
||||||||||||||||
Gene Count |
2642 |
||||||||||||||||
Estimated Size |
2546891 |
||||||||||||||||
Sequencing Depth
(MIGS-31.1)
![]() |
100x |
||||||||||||||||
Genbank Anomalous Assembly |
No |
||||||||||||||||
Genbank Anomalous Reason |
|
||||||||||||||||
Annotation Pipeline |
IMG Annotation Pipeline v.5.1.6 |
||||||||||||||||
Added By |
Supratim Mukherjee
on 2022-06-13 |
||||||||||||||||
Last Modified By |
JGI automated process
on 2022-06-27 |
||||||||||||||||
ORF Comparison Tools
![]() |
|
||||||||||||||||
PROJECT EXTERNAL REFERENCES | |||||||||||||||||
IMG Taxon ID
![]() |
2966280218 |
||||||||||||||||
Genbank Accession
![]() |
|
||||||||||||||||
Genbank Release Date |
|
||||||||||||||||
ANALYSIS PROJECT COMPOSITION | |||||||||||||||||
Study |
Levilactobacillus brevis YSJ3 |
||||||||||||||||
Number of Studies
![]() |
1 |
||||||||||||||||
Number of Projects
![]() |
1 |
||||||||||||||||
Number of Related Analysis Projects
![]() |
0 |
You are going to add the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the AP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Changing the AP visibility will also change downgrade visibility on the following items:
Do you want to continue with this visibility change?