ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0556028
Analysis Project Name Metatranscriptome of biofilm microbial communities from hotspring runoff channel in Yellowstone National Park, Wyoming, USA - Creek_T3_2 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of biofilm microbial communities from hotspring runoff channel in Yellowstone National Park, Wyoming, USA - Creek_T3_2
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 272156
Completion Status Complete
IMG Completion Date 2022-06-22
PI Debashish Bhattacharya
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2022-06-06 21:35:29 - MEGAHIT v1.2.9
Scaffold Count 80178
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 112498
Estimated Size 57538838
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.8
Added By JGI automated process on 2022-05-25
Last Modified By JGI automated process on 2022-06-23
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300053682
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Adjacent soil, biofilm, and endolithic microbial communities from hotspring runoff channel in Yellowstone National Park, Wyoming, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1383168 (Portal)
ITS Analysis Project Name Creek_MT_T3_2 (2)
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000481

 

 

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