Studies
|
53,969 |
|
Biosamples
|
170,233 |
|
Sequencing Projects
|
480,728 |
|
Analysis Projects
|
360,451 |
| Organisms | 467,879 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0554443 |
| Analysis Project Name |
Metatranscriptome of soil microbial communities from peatland in Alberta, Canada - SB-91-mossy 0-10 cm (Metagenome Metatranscriptome) |
| Analysis Project Name Stem |
Metatranscriptome of soil microbial communities from peatland in Alberta, Canada - SB-91-mossy 0-10 cm |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metatranscriptome Analysis |
|
IMG Submission ID
|
270235 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2022-06-09 |
| PI | Maria Strack |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
megahit v. 2022-04-26 07:19:40 - MEGAHIT v1.2.9 |
|
Scaffold Count
|
92019 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
103423 |
| Estimated Size |
43062264 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.1.6 |
| Added By |
JGI automated process
on 2022-05-16 |
| Last Modified By |
JGI automated process
on 2022-06-10 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300053028 |
| IMG RNA-Seq ID |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Soil microbial communities from peatland in Alberta, Canada |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
2 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Restricted |
|
ITS Analysis Project ID
|
1285948 (Portal) |
|
ITS Analysis Project Name
|
SB-91-mossy 0-10 cm metaT Annotation |
|
ITS Analysis Product Name
|
Metagenome Metatranscriptome |
| ITS Version Number |
1 |
|
JGI Award DOI
|
10.46936/10.25585/60001230 |
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