ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0530708
Analysis Project Name Metatranscriptome of peat moss microbial communities from bog in Frasne, France - Sphagnum fallax 12OTC_SF_FR (Eukaryote Community Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of peat moss microbial communities from bog in Frasne, France - Sphagnum fallax 12OTC_SF_FR
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 284684
Completion Status Complete
IMG Completion Date 2022-09-24
PI David Weston
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) MEGAHIT v. 1.2.9
Scaffold Count 416234
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 522373
Estimated Size 249895448
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.9
Added By JGI automated process on 2022-02-26
Last Modified By JGI automated process on 2022-09-26
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300056991
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Peat moss microbial communities from sphagnum bogs in various regions of Europe
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1304880 (Portal)
ITS Analysis Project Name Sphagnum fallax 12OTC_SF_FR_RNA metatranscriptome
ITS Analysis Product Name Eukaryote Community Metatranscriptome
ITS Version Number 1
Library Names NHZAP
JGI Award DOI