ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0523472
Analysis Project Name Escherichia coli FDAARGOS_1248
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SMRT v. 8.0.0, HGAP v. 4, SPAdes v. 3.14.1
IMG Decontamination
IMG Decontamination Method
Scaffold Count
Contig Count 7
Gene Calling Method (MIGS-32)
Gene Count 4928
Estimated Size 5070000
Sequencing Depth (MIGS-31.1) 947.14x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2021-12-24
Last Modified By
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID CP069548 (GCA_016889845.1)
Release Date 2021-06-04
NCBI Genbank Version CP069548.1
Genbank ID CP069547 (GCA_016889845.1)
Release Date 2021-06-04
NCBI Genbank Version CP069547.1
Genbank ID CP069546 (GCA_016889845.1)
Release Date 2021-06-04
NCBI Genbank Version CP069546.1
Genbank ID CP069545 (GCA_016889845.1)
Release Date 2021-06-04
NCBI Genbank Version CP069545.1
Genbank ID CP069544 (GCA_016889845.1)
Release Date 2021-06-04
NCBI Genbank Version CP069544.1
Genbank ID CP069543 (GCA_016889845.1)
Release Date 2021-06-04
NCBI Genbank Version CP069543.1
Genbank ID CP069542 (GCA_016889845.1)
Release Date 2021-06-04
NCBI Genbank Version CP069542.1
Genbank Release Date 2021-06-04
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing as part of FDA-ARGOS: dAtabase for Regulatory Grade micrObial Sequences project
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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