Studies
|
56,036 |
|
Biosamples
|
191,586 |
|
Sequencing Projects
|
515,942 |
|
Analysis Projects
|
381,633 |
| Organisms | 480,439 |
| ANALYSIS PROJECT INFORMATION | |||||
|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0510121 |
||||
| Analysis Project Name |
Megaira endosymbiont of Mesostigma viride MegNEIS296 |
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|
Analysis Project Name Suffix
|
|
||||
|
Analysis Project Type
|
Metagenome-Assembled Genome |
||||
|
IMG Submission ID
|
259354 | ||||
|
NCBI BioProject Accession
|
|
||||
|
NCBI BioSample Accession
|
SAMN21822563 |
||||
| Completion Status |
Complete |
||||
|
IMG Completion Date
|
2022-01-13 |
||||
| PI | Stefanos Siozios | ||||
|
Analysis Project Description
|
Submitting a public MAG from NCBI to IMG |
||||
| Visibility | Public | ||||
| ANALYSIS PROJECT METADATA | |||||
| GOLD Organism Name |
Megaira endosymbiont of Mesostigma viride MegNEIS296 |
||||
|
NCBI Taxonomy ID
|
2866314 |
||||
| Phylum | PROTEOBACTERIA-ALPHA | ||||
| Phylogeny Suggestion |
|
||||
|
Genus
|
|
||||
| Species |
Megaira endosymbiont of Mesostigma viride MegNEIS296 |
||||
| Strain |
MegNEIS296 |
||||
| Domain |
BACTERIAL |
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| NCBI Superkingdom |
Bacteria |
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| NCBI Kingdom |
|
||||
|
Number of tRNAs
|
|
||||
|
tRNA Software
|
|
||||
|
Completeness Strategy
|
|
||||
|
Scaffold Count
|
2 |
||||
|
Contig Count
|
|
||||
|
Binning Method
|
Unknown |
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|
Binning Parameters
|
|
||||
|
Reassembly Attempted
|
|
||||
|
MAG Coverage Software
|
|
||||
|
Gene Calling Method
(MIGS-32)
|
|
||||
| Gene Count |
1436 |
||||
| Estimated Size |
1532409 |
||||
|
Sequencing Depth
(MIGS-31.1)
|
|
||||
| Contamination Percentage |
|
||||
| Completeness Percentage |
|
||||
| Genbank Anomalous Assembly |
No |
||||
| Genbank Anomalous Reason |
|
||||
| Annotation Pipeline |
IMG Annotation Pipeline v.5.1.1 |
||||
| Added By | Supratim Mukherjee on 2021-12-15 | ||||
| Last Modified By | JGI automated process on 2022-01-21 | ||||
|
ORF Comparison Tools
|
|
||||
|
16S Recovered
|
|
||||
|
16S Recovery Software
|
|
||||
| PROJECT EXTERNAL REFERENCES | |||||
|
IMG Taxon ID
|
2935526068 |
||||
|
Genbank Accession
|
|
||||
| Genbank Release Date |
|
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| Genome Publication |
|
||||
| ANALYSIS PROJECT COMPOSITION | |||||
| Study |
Pangenome analysis of Rickettsia and Megaira |
||||
| Source Analysis Project |
Plant host associated microbial communities from Japan - Mesostigma viride |
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