ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0510010
Analysis Project Name Biofilm microbial communities from seawater aquarium denitrification system in Montreal, Quebec, Canada - AucOB
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 259370
Completion Status Complete
IMG Completion Date 2022-01-06
PI Richard Villemur
Analysis Project Description Annotations of de novo assembled transcripts
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Trinity v. 2.9.1
Scaffold Count 128853
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 144875
Estimated Size 54625270
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.25
Added By Richard Villemur on 2021-12-11
Last Modified By JGI automated process on 2022-01-06
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300049839
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Biofilm microbial communities of laboratory-scale, methanol-fed denitrifying cultures
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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