ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0509209
Analysis Project Name Prefix Metatranscriptome of seawater microbial communities from North Atlantic Ocean - SX-70
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 258906
Completion Status Complete
IMG Completion Date 2021-12-10
PI Matthew Sullivan
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2021-12-01 00:31:16 - MEGAHIT v1.2.9
Scaffold Count 104901
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 115274
Estimated Size 49925665
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.25
Added By JGI automated process on 2021-12-02
Last Modified By JGI automated process on 2021-12-10
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300049630
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Seawater microbial and viral communities from North Atlantic Ocean
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1347908 (Portal)
ITS Analysis Project Name SX-70_MT Annotation(v2)
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 2

 

 

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