ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0508985
Analysis Project Name Prefix Metatranscriptome of alkaline spring water microbial communities from Santa Elena Complex in Costa Rica - Spring9
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Galina Ovchinnikova
Analysis Project Description Assembly and annotation of public SRA data set.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Custom JGI assembly, Nielsen et. al.
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Galina Ovchinnikova on 2021-11-30
Last Modified By Galina Ovchinnikova on 2021-12-01
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Alkaline spring water microbial communities from Santa Elena Complex in Costa Rica
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1

 

 

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