ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0505706 |
Analysis Project Name |
Co-assembly of Harvard Forest metagenomes from Barre Woods |
Analysis Project Name Suffix
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Analysis Project Type
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Combined Assembly |
IMG Submission ID
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264502 |
Completion Status |
Complete |
IMG Completion Date
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2022-03-22 |
PI | Jeffrey Blanchard |
Analysis Project Description
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Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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MetaHipMer2 v. 2.0.1.2.523-g6068fea-dirty-master |
IMG Decontamination
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IMG Decontamination Method
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Scaffold Count
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70861350 |
Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count |
126665893 |
Estimated Size |
73034096699 |
Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.5.1.5 |
Added By | JGI automated process on 2021-10-29 |
Last Modified By | JGI automated process on 2022-05-25 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300050821 |
Genbank Accession
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Genbank Release Date |
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SRA Runs |
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Genome Publication |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States |
Number of Studies
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1 |
Number of Biosamples
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28 |
Number of Projects
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28 |
Number of Related Analysis Projects
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28 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
JGI Data Utilization Status
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Unrestricted |
ITS Analysis Project ID
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1343191 (Portal) |
ITS Analysis Project Name
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Co-assembly of Harvard Forest metagenomes from Barre Woods |
ITS Analysis Product Name
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Combined Assembly |
ITS Version Number |
1 |
Library Names
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BYYXY, BYYXZ, BYYYA, BYYYB, BYYYC, BYYYG, BYYYH, BYYYN, BYYYO, BYYYP, BYYYS, BYYYT, BYYYU, BYYYW, BYYYX, BYYYY, BYYYZ, BYYZA, BYYZB, BYYZC, BYYZG, BYYZH, BYYZN, BYYZO, BYYZP, BYYZS, BYYZT, BYYZU |
JGI Award DOI
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10.46936/fics.proj.2016.49483/60006003 |
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