Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0505706 |
| Analysis Project Name |
Co-assembly of Harvard Forest metagenomes from Barre Woods |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Combined Assembly |
|
IMG Submission ID
|
264502 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2022-03-22 |
| PI | Jeffrey Blanchard |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
MetaHipMer2 v. 2.0.1.2.523-g6068fea-dirty-master |
|
IMG Decontamination
|
|
|
IMG Decontamination Method
|
|
|
Scaffold Count
|
70861350 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
126665893 |
| Estimated Size |
73034096699 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.1.5 |
| Added By | JGI automated process on 2021-10-29 |
| Last Modified By | JGI automated process on 2022-05-25 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300050821 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
28 |
|
Number of Projects
|
28 |
|
Number of Related Analysis Projects
|
28 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Unrestricted |
|
ITS Analysis Project ID
|
1343191 (Portal) |
|
ITS Analysis Project Name
|
Co-assembly of Harvard Forest metagenomes from Barre Woods |
|
ITS Analysis Product Name
|
Combined Assembly |
| ITS Version Number |
1 |
|
Library Names
|
BYYXY, BYYXZ, BYYYA, BYYYB, BYYYC, BYYYG, BYYYH, BYYYN, BYYYO, BYYYP, BYYYS, BYYYT, BYYYU, BYYYW, BYYYX, BYYYY, BYYYZ, BYYZA, BYYZB, BYYZC, BYYZG, BYYZH, BYYZN, BYYZO, BYYZP, BYYZS, BYYZT, BYYZU |
|
JGI Award DOI
|
10.46936/fics.proj.2016.49483/60006003 |
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