ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0504724
Analysis Project Name Metatranscriptome of seawater microbial communities from Mount Hope Bay, Rhode Island, USA - RI_1B2_100118_1351 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of seawater microbial communities from Mount Hope Bay, Rhode Island, USA - RI_1B2_100118_1351
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 268684
Completion Status Complete
IMG Completion Date 2022-05-10
PI Eric Wommack
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2022-04-29 04:50:00 - MEGAHIT v1.2.9
Scaffold Count 205044
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 256104
Estimated Size 105335072
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.5
Added By JGI automated process on 2021-10-16
Last Modified By JGI automated process on 2022-08-04
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300052328
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Water microbial communities from various aquatic ecosystems in USA and North Atlantic Ocean
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1335756 (Portal)
ITS Analysis Project Name RI_1B2_MT_100118_1351 Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
Library Names NAAHP
JGI Award DOI 10.46936/10.25585/60000489

 

 

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