ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0500780
Analysis Project Name Prefix Marivita sp. SBSPR1
Analysis Project Name Suffix
Analysis Project Type Metagenome-Assembled Genome
IMG Submission ID 255472
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession
Completion Status Incomplete
IMG Completion Date
PI Clifton B de Mesquita
Analysis Project Description Improved Marivita MAG from R1_B_D2
Visibility Public
ANALYSIS PROJECT METADATA
GOLD Organism Name Marivita sp. SBSPR1
NCBI Taxonomy ID 659428
Phylum PROTEOBACTERIA-ALPHA
Phylogeny Suggestion
Genus Marivita
Species Marivita sp. SBSPR1
Strain SBSPR1
Domain BACTERIAL
NCBI Superkingdom Bacteria
NCBI Kingdom
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 82
Contig Count
Binning Method MetaBAT, manually extended and reassembled with Geneious
Binning Parameters
Reassembly Attempted
MAG Coverage Software
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size 3604362
Sequencing Depth (MIGS-31.1)
Contamination Percentage 0.74
Completeness Percentage 99.1
Annotation Pipeline IMG Annotation Pipeline v.5.0.24
Added By Galina Ovchinnikova on 2021-08-25
Last Modified By JGI automated process on 2021-08-26
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank Release Date
MAG Publication
ANALYSIS PROJECT COMPOSITION
Study Salt pond water, soil and salt crust microbial communities from South San Francisco under conditions of wetland restoration.
Source Analysis Project Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R1_B_D2_MG (SPAdes)

 

 

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