Studies
|
56,334 |
|
Biosamples
|
196,986 |
|
Sequencing Projects
|
525,358 |
|
Analysis Projects
|
385,429 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0500728 |
| Analysis Project Name |
GRE coassembly MetaHipMer |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Combined Assembly |
|
IMG Submission ID
|
255440 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2021-09-03 |
| PI | Jennifer Pett-Ridge |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
MetaHipmer2 v. 2.0.1.v2.0.0-110-gb87d7c1-Issue69 |
|
IMG Decontamination
|
|
|
IMG Decontamination Method
|
|
|
Scaffold Count
|
55342847 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
112151078 |
| Estimated Size |
74970251022 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.24 |
| Added By | JGI automated process on 2021-08-24 |
| Last Modified By | JGI automated process on 2022-05-25 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300047160 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
95 |
|
Number of Projects
|
95 |
|
Number of Related Analysis Projects
|
96 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Restricted |
|
ITS Analysis Project ID
|
1336702 (Portal) |
|
ITS Analysis Project Name
|
GRE coassembly MetaHipMer |
|
ITS Analysis Product Name
|
Combined Assembly |
| ITS Version Number |
1 |
|
Library Names
|
CXZNB, CXZNC, CXZNG, CXZNH, CXZNN, CXZNO, CXZNP, CXZNS, CXZNT, CYONP, CYONS, CYONT, CYONU, CYONW, CYONX, CYONY, CYONZ, CYOOA, CYOOB, CYOOC, CYOOG, CYOOH, CYOON, CYOOO, CYUHW, CYUHX, CYUHY, CYUHZ, CYUNA, CYUNB, CYUNC, CYUNG, CYUNH, CYUNN, CYUNO, CYUNP, CYUNS, CYUNT, CYUNU, CYUNW, CZGOA, CZGOB, CZGOC, CZGOG, CZGOH, CZGON, CZGOO, CZGOP, CZGUA, CZGUB, CZGUC, CZGUG, CZGUH, CZGUN, CZGUO, CZGUP, CZGUS, CZGUT, CZGUU, CZGUW, CZGUX, CZGUY, CZGUZ, CZGWA, CZOHZ, CZONA, CZONB, CZONG, CZONH, CZONN, CZONO, GAAGG, GAAGH, GAAGN, GAAGO, GAAGP, GAAGS, GAAGT, GAAGU, GAAGW, GAAGX, GAAGY, GAAGZ, GAAHA, GAAHB, GAAHC, GAAHG, GAAHH, GAAHN, GAAHO, GAAHP, GAAHS, GAAHT, GAAHU |
|
JGI Award DOI
|
|
