Studies
|
49,858 |
|
Biosamples
|
147,136 |
|
Sequencing Projects
|
436,400 |
|
Analysis Projects
|
327,762 |
| Organisms | 418,849 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0500728 |
| Analysis Project Name Prefix |
GRE coassembly MetaHipMer |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Combined Assembly |
|
IMG Submission ID
|
255440 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2021-09-03 |
| PI | Jennifer Pett-Ridge |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
MetaHipmer2 v. 2.0.1.v2.0.0-110-gb87d7c1-Issue69 |
|
IMG Decontamination
|
|
|
IMG Decontamination Method
|
|
|
Scaffold Count
|
55342847 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
112151078 |
| Estimated Size |
74970251022 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.24 |
| Added By |
JGI automated process
on 2021-08-24 |
| Last Modified By |
JGI automated process
on 2021-09-17 |
|
ORF Comparison Tools
|
|
|
16S Recovered
|
|
|
16S Recovery Software
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300047160 |
| IMG Metagenome bin count | 0 |
| IMG Predicted viruses |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
95 |
|
Number of Projects
|
95 |
|
Number of Related Analysis Projects
|
94 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
ITS Analysis Project ID
|
1336702 (Portal) |
|
ITS Analysis Project Name
|
GRE coassembly MetaHipMer |
|
ITS Analysis Product Name
|
Combined Assembly |
| ITS Version Number |
1 |
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