ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0500652
Analysis Project Name Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 270853
Completion Status Complete
IMG Completion Date 2022-06-14
PI Mitchel Doktycz
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.15.2
Scaffold Count 974068
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1117716
Estimated Size 653127571
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.v5.0.25.aws
Added By JGI automated process on 2021-08-21
Last Modified By JGI automated process on 2022-08-16
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300053131
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Roots, rhizosphere and bulk soil microbial communities from poplar common garden sites in Oregon, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1336087 (Portal)
ITS Analysis Project Name GW-9591-Co3_35_48 endosphere metagenome
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000017

 

 

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