ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0499981
Analysis Project Name River sediment microbial communities from Pennsylvania, USA - shaverscreek_2019_sed_WHONDRS-S19S_0064
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 258756
Completion Status Complete
IMG Completion Date 2021-12-03
PI Kelly Wrighton
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.15.2
Scaffold Count 378904
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 475501
Estimated Size 199197371
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.25
Added By JGI automated process on 2021-08-17
Last Modified By JGI automated process on 2022-10-25
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300049480
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater microbial communities from rivers from various locations all over the world
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1323354 (Portal)
ITS Analysis Project Name shaverscreek_2019_sed_WHONDRS-S19S_0064 MG
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001289

 

 

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